I'm still rocking the long cardboard box, but i'm hoping to condense my collection to fit in something less conspicous.

Yeah, my storage consists of cardboard right now too. I just can't decide which of those great bags/cases I like most! ^-^

I bought an under-the-bed shoe storage container that holds most of my toys. Some toys (like my Double Trouble Thick because of it's length) are stored in their original packaging, some are stored in plastic zip baggies, and others are stored in the satin pouches that came with them.

I love the tool box suggestion. I was browsing the other day and found this on EdenTube HomeMadeToyPouch

I'm going to get some on sale fabric to make a bunch. Then they can all coordinate or you can get fabric with similar colors to your toys so you can easily know which is which.